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1

Horizontal gene transfer: building the web of life

Soucy, Shannon M., Huang, Jinling, Gogarten, Johann Peter

Journal:

Nature Reviews Genetics

Year:

2015

Language:

english

File:

PDF, 593 KB

english, 2015

2

Prokaryotic evolution and the tree of life are two different things

Eric Bapteste, Maureen A O'Malley, Robert G Beiko, Marc Ereshefsky, J Peter Gogarten, Laura Franklin-Hall, François-Joseph Lapointe, John Dupré, Tal Dagan, Yan Boucher, William Martin

Journal:

Year:

2009

Language:

english

File:

PDF, 386 KB

english, 2009

3

[Methods in Molecular Biology] Horizontal Gene Transfer Volume 532 || Genome Acquisition in Horizontal Gene Transfer: Symbiogenesis and Macromolecular Sequence Analysis

Gogarten, Maria Boekels, Gogarten, Johann Peter, Olendzenski, Lorraine C.

Year:

2009

Language:

english

File:

PDF, 597 KB

english, 2009

4

The effects of heavy meteorite bombardment on the early evolution — The emergence of the three Domains of life

Maria Gogarten-Boekels, Elena Hilario, J. Peter Gogarten

Journal:

Origins of Life and Evolution of Biospheres

Year:

1995

Language:

english

File:

PDF, 1.21 MB

english, 1995

5

cDNA cloning of a mandibular organ inhibiting hormone from the spider crabLibinia emarginata

Lei Liu, Hans Laufer, Peter J. Gogarten, Minhua Wang

Journal:

Invertebrate Neuroscience

Year:

1997

Language:

english

File:

PDF, 569 KB

english, 1997

6

Ancient gene duplications and the root(s) of the tree of life

Olga Zhaxybayeva, Pascal Lapierre, J. Peter Gogarten

Journal:

Year:

2005

Language:

english

File:

PDF, 355 KB

english, 2005

7

Natural taxonomy in light of horizontal gene transfer

Cheryl P. Andam, David Williams, J. Peter Gogarten

Journal:

Biology & Philosophy

Year:

2010

Language:

english

File:

PDF, 281 KB

english, 2010

8

Horizontal gene transfer, genome innovation and evolution

Gogarten, J. Peter, Townsend, Jeffrey P.

Journal:

Nature Reviews Microbiology

Year:

2005

Language:

english

File:

PDF, 304 KB

english, 2005

9

Cladogenesis, coalescence and the evolution of the three domains of life

Olga Zhaxybayeva, J. Peter Gogarten

Journal:

Trends in Genetics

Year:

2004

Language:

english

File:

PDF, 767 KB

english, 2004

10

Physical properties of the cell wall of photoautotrophic suspension cells from Chenopodium rubrum L

Johann Peter Gogarten

Journal:

Year:

1988

Language:

english

File:

PDF, 1.05 MB

english, 1988

11

Metabarcoding of eukaryotic parasite communities describes diverse parasite assemblages spanning the primate phylogeny

Gogarten, Jan F., Calvignac‐Spencer, Sébastien, Nunn, Charles L., Ulrich, Markus, Saiepour, Nasrin, Nielsen, Henrik Vedel, Deschner, Tobias, Fichtel, Claudia, Kappeler, Peter M., Knauf, Sascha, Müller

Journal:

Molecular Ecology Resources

Year:

2019

Language:

english

File:

PDF, 11.87 MB

english, 2019

12

Horizontal transfer of ATPase genes — the tree of life becomes a net of life

Elena Hilario, Johann Peter Gogarten

Journal:

Year:

1993

Language:

english

File:

PDF, 700 KB

english, 1993

13

The intein of the Thermoplasma A-ATPase A subunit: Structure, evolution and expression inE. coli

Alireza G Senejani, Elena Hilario, J Peter Gogarten

Journal:

BMC Biochemistry

Year:

2001

Language:

english

File:

PDF, 1.55 MB

english, 2001

14

Home and away- the evolutionary dynamics of homing endonucleases

Adi Barzel, Uri Obolski, Johann Peter Gogarten, Martin Kupiec, Lilach Hadany

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 1.38 MB

english, 2011

15

A Rooted Net of Life

David Williams, Gregory P Fournier, Pascal Lapierre, Kristen S Swithers, Anna G Green, Cheryl P Andam, J Peter Gogarten

Journal:

Year:

2011

Language:

english

File:

PDF, 434 KB

english, 2011

16

Biased gene transfer and its implications for the concept of lineage

Cheryl P Andam, J Peter Gogarten

Journal:

Year:

2011

Language:

english

File:

PDF, 719 KB

english, 2011

17

Trees in the Web of Life

Kristen S Swithers, J Peter Gogarten, Gregory P Fournier

Journal:

Journal of Biology

Year:

2009

Language:

english

File:

PDF, 708 KB

english, 2009

18

Letter to the editor

Richard W Mercier, Parin Chaivisuthangkurar, Johann Peter Gogarten

Journal:

Plant Molecular Biology

Year:

1993

Language:

english

File:

PDF, 547 KB

english, 1993

19

Evolution of proton pumping ATPases: Rooting the tree of life

Johann Peter Gogarten, Lincoln Taiz

Journal:

Photosynthesis Research

Year:

1992

Language:

english

File:

PDF, 928 KB

english, 1992

20

Which is the most conserved group of proteins? Homology-orthology, paralogy, xenology, and the fusion of independent lineages

J. Peter Gogarten

Journal:

Journal of Molecular Evolution

Year:

1994

Language:

english

File:

PDF, 267 KB

english, 1994

21

Fluxes and compartmentation of 3-O-methyl-D-glucose inRiccia fluitans

Johann Peter Gogarten, Friedrich-Wilhelm Bentrup

Journal:

Year:

1983

Language:

english

File:

PDF, 882 KB

english, 1983

22

Substrate specifity of the hexose carrier in the plasmalemma ofChenopodiumsuspension cells probed by transmembrane exchange diffusion

Johann Peter Gogarten, Friedrich-Wilhelm Bentrup

Journal:

Year:

1989

Language:

english

File:

PDF, 817 KB

english, 1989

23

Phlorizin inhibits hexose transport across the plasmalemma ofRiccia fluitans

Hubert Felle, Johann Peter Gogarten, Friedrich-Wilhelm Bentrup

Journal:

Year:

1983

Language:

english

File:

PDF, 358 KB

english, 1983

24

Evolution of structure and function of V-ATPases

Henrik Kibak, Lincoln Taiz, Thomas Starke, Paul Bernasconi, Johann Peter Gogarten

Journal:

Journal of Bioenergetics and Biomembranes

Year:

1992

Language:

english

File:

PDF, 1012 KB

english, 1992

25

Sugar nucleotides dissipate ATP-generated transmembrane pH gradient in Golgi vesicles from suspension-cell protoplasts ofChenopodium rubrumL.

Maria Gogarten-Boekels, Johann Peter Gogarten, Friedrich-Wilhelm Bentrup

Journal:

Year:

1988

Language:

english

File:

PDF, 917 KB

english, 1988

26

Physical properties of the cell wall of photoautotrophic suspension cells fromChenopodium rubrumL.

Johann Peter Gogarten

Journal:

Year:

1988

Language:

english

File:

PDF, 691 KB

english, 1988

27

Gene duplications and horizontal gene transfer during early evolution

J. Peter Gogarten, Elena Hilario, Lorraine Olendzenski

Journal:

Origins of Life and Evolution of Biospheres

Year:

1996

Language:

english

File:

PDF, 90 KB

english, 1996

28

The Prokaryote-to-Eukaryote Transition Reflected in the Evolution of the V/F/A-ATPase Catalytic and Proteolipid Subunits

Elena Hilario, Johann Peter Gogarten

Journal:

Journal of Molecular Evolution

Year:

1998

Language:

english

File:

PDF, 880 KB

english, 1998

29

Signature of a Primitive Genetic Code in Ancient Protein Lineages

Gregory P. Fournier, J. Peter Gogarten

Journal:

Journal of Molecular Evolution

Year:

2007

Language:

english

File:

PDF, 368 KB

english, 2007

30

Horizontal Transfer of Archaeal Genes into the Deinococcaceae: Detection by Molecular and Computer-Based Approaches

Lorraine Olendzenski, Lei Liu *, † , Olga Zhaxybayeva, Ryan Murphey, Dong-Guk Shin, J. Peter Gogarten

Journal:

Journal of Molecular Evolution

Year:

2000

Language:

english

File:

PDF, 972 KB

english, 2000

31

Cladistics: A Practical Primer on CD-ROM. By Peter Skelton and Andrew Smith, with accompanying booklet by NealeMonks. Cambridge University Press, 40 West 20th Street, New York, NY 10011-4211, ISBN: 0-521-52341-9, Price $55.00

Olga Zhaxybayeva, J. Peter Gogarten

Journal:

Origins of Life and Evolution of Biospheres

Year:

2005

Language:

english

File:

PDF, 33 KB

english, 2005

32

Molecular Evolution of Aminoacyl tRNA Synthetase Proteins in the Early History of Life

Gregory P. Fournier, Cheryl P. Andam, Eric J. Alm, J. Peter Gogarten

Journal:

Origins of Life and Evolution of Biospheres

Year:

2011

Language:

english

File:

PDF, 323 KB

english, 2011

33

Gene Transfer and the Reconstruction of Life’s Early History from Genomic Data

J. Peter Gogarten, Gregory Fournier, Olga Zhaxybayeva

Journal:

Space Science Reviews

Year:

2008

Language:

english

File:

PDF, 523 KB

english, 2008

34

A hyperconserved protein in Prochlorococcus and marine Synechococcus

Olga Zhaxybayeva, J. Peter Gogarten, W. Ford Doolittle

Journal:

FEMS Microbiology Letters

Year:

2007

Language:

english

File:

PDF, 93 KB

english, 2007

35

Multilevel populations and the evolution of antibiotic resistance through horizontal gene transfer

Cheryl P. Andam, Gregory P. Fournier, Johann Peter Gogarten

Journal:

FEMS Microbiology Reviews

Year:

2011

Language:

english

File:

PDF, 510 KB

english, 2011

36

Evolution of Genes and Organisms : The Tree/Web of Life in Light of Horizontal Gene Transfer

Lorraine Olendzenski, J. Peter Gogarten

Journal:

Annals of the New York Academy of Sciences

Year:

2009

Language:

english

File:

PDF, 264 KB

english, 2009

37

[Methods in Molecular Biology] Horizontal Gene Transfer Volume 532 || Horizontal Gene Transfer and the Evolution of Methanogenic Pathways

Gogarten, Maria Boekels, Gogarten, Johann Peter, Olendzenski, Lorraine C.

Year:

2009

Language:

english

File:

PDF, 567 KB

english, 2009

38

[Methods in Molecular Biology] Horizontal Gene Transfer Volume 532 ||

Gogarten, Maria Boekels, Gogarten, Johann Peter, Olendzenski, Lorraine C.

Year:

2009

Language:

english

File:

PDF, 667 KB

english, 2009

39

Spliceosomal Introns: New Insights into their Evolution

Olga Zhaxybayeva, J.Peter Gogarten

Journal:

Current Biology

Year:

2003

Language:

english

File:

PDF, 53 KB

english, 2003

40

Distribution of F- and A/V-type ATPases in Thermus scotoductus and other closely related species

Pascal Lapierre, Reshma Shial, J.Peter Gogarten

Journal:

Systematic and Applied Microbiology

Year:

2006

Language:

english

File:

PDF, 266 KB

english, 2006

41

Genome mosaicism and organismal lineages

Olga Zhaxybayeva, Pascal Lapierre, J.Peter Gogarten

Journal:

Trends in Genetics

Year:

2004

Language:

english

File:

PDF, 145 KB

english, 2004

42

Ancient horizontal gene transfer can benefit phylogenetic reconstruction

Jinling Huang, Johann Peter Gogarten

Journal:

Trends in Genetics

Year:

2006

Language:

english

File:

PDF, 141 KB

english, 2006

43

Estimating the size of the bacterial pan-genome

Pascal Lapierre, J. Peter Gogarten

Journal:

Trends in Genetics

Year:

2009

Language:

english

File:

PDF, 315 KB

english, 2009

44

Gene Transfer: Gene Swapping Craze Reaches Eukaryotes

J.Peter Gogarten

Journal:

Current Biology

Year:

2003

Language:

english

File:

PDF, 66 KB

english, 2003

45

A hybrid clustering approach to recognition of protein families in 114 microbial genomes

Timothy J Harlow, J Peter Gogarten, Mark A Ragan

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 443 KB

english, 2004

46

PentaPlot: A software tool for the illustration of genome mosaicism

Lutz Hamel, Olga Zhaxybayeva, J Peter Gogarten

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 573 KB

english, 2005

47

BranchClust: a phylogenetic algorithm for selecting gene families

Maria S Poptsova, J Peter Gogarten

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.09 MB

english, 2007

48

Inteins, introns, and homing endonucleases: recent revelations about the life cycle of parasitic genetic elements

J Peter Gogarten, Elena Hilario

Journal:

BMC Evolutionary Biology

Year:

2006

Language:

english

File:

PDF, 372 KB

english, 2006

49

The power of phylogenetic approaches to detect horizontally transferred genes

Maria S Poptsova, J Peter Gogarten

Journal:

BMC Evolutionary Biology

Year:

2007

Language:

english

File:

PDF, 2.63 MB

english, 2007

50

Evolution ofmalABC transporter operons in theThermococcalesandThermotogales

Kenneth M Noll, Pascal Lapierre, J Peter Gogarten, Dhaval M Nanavati

Journal:

BMC Evolutionary Biology

Year:

2008

Language:

english

File:

PDF, 625 KB

english, 2008

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